Fitness data for HSERO_RS06720 in Herbaspirillum seropedicae SmR1

Rieske (2Fe-2S) protein
SEED: Ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S) protein (EC 1.14.12.18)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.3 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.2 -2.4 compare
carbon source L-Malic (C) -1.2 -2.0 compare
carbon source L-Arabinose (C) -1.0 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.0 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.9 -2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.6 compare
stress Thallium(I) acetate 0.001 mg/ml -0.9 -2.2 compare
plant Control soil assay; outgrowth in LB -0.8 -1.1 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.8 -2.2 compare
carbon source pyruvate (C) -0.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.2 compare
carbon source L-Fucose (C) -0.8 -2.4 compare
carbon source L-mannose (C) -0.7 -2.2 compare
stress Cobalt chloride 0.2 mM -0.7 -0.9 compare
stress A22 0.04 mg/ml -0.7 -1.9 compare
carbon source D-Mannose (C) -0.7 -1.8 compare
stress Sisomicin 0.125 mg/ml -0.7 -0.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.3 compare