Fitness data for HSERO_RS06565 in Herbaspirillum seropedicae SmR1

1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
SEED: 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25)
KEGG: 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.8 -2.0 compare
carbon source D-Glucose (C) -0.7 -1.2 compare
stress sodium fluoride 100 mM -0.7 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.9 compare
carbon source L-Lactate (C) -0.7 -1.9 compare
carbon source D-Mannitol (C) -0.6 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.5 +2.2 compare
nitrogen source L-Proline (N) +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.6 compare
carbon source L-Asparagine (C) +0.6 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.3 compare
carbon source D-Galacturonic Acid (C) +0.7 +1.4 compare
carbon source Glycerol (C) +0.7 +2.0 compare
carbon source L-Arabinose (C) +0.7 +1.3 compare
carbon source D-Ribose (C) +0.7 +1.8 compare
stress nitrate 200 mM +0.8 +1.4 compare