Fitness data for HSERO_RS06555 in Herbaspirillum seropedicae SmR1

benzoate 1,2-dioxygenase subunit beta
SEED: Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.0 -3.4 compare
carbon source pyruvate (C) -0.8 -1.5 compare
carbon source L-Rhamnose (C) -0.8 -1.2 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.8 -3.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -1.5 compare
stress nitrate 200 mM -0.7 -1.4 compare
carbon source Xylitol (C) -0.7 -1.7 compare
stress Dimethyl Sulfoxide 5 vol% -0.6 -1.3 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -0.9 compare
nitrogen source L-Proline (N) -0.6 -2.5 compare
stress Fusidic 0.025 mg/ml -0.6 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.6 +1.3 compare
r2a control R2A control +0.7 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.5 +2.1 compare