Fitness data for HSERO_RS06545 in Herbaspirillum seropedicae SmR1

catechol 1,2-dioxygenase
SEED: Catechol 1,2-dioxygenase (EC 1.13.11.1)
KEGG: catechol 1,2-dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
control NoPredeControl -0.9 -2.1 compare
carbon source L-Arabinose (C) -0.7 -1.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.7 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.5 compare
micoeukaryotes C.elegans, mixed culture-1 -0.6 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.3 compare
plant Control soil assay; outgrowth in LB -0.6 -1.7 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.5 -2.1 compare
nutrient L-Histidine -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.9 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.5 -1.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.5 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.6 compare
stress Cobalt chloride 0.2 mM +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.8 compare
stress nitrate 200 mM +0.6 +2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +1.1 compare
stress Sisomicin 0.125 mg/ml +0.8 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.4 +1.4 compare