Fitness data for HSERO_RS06530 in Herbaspirillum seropedicae SmR1
muconolactone delta-isomerase
SEED: Muconolactone isomerase (EC 5.3.3.4)
KEGG: muconolactone D-isomerase
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)
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| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | Xylitol (C) | -2.0 | -1.2 | compare |
| carbon source | L-mannose (C) | -1.9 | -1.4 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | -1.7 | -1.1 | compare |
| control | NoPredeControl | -1.7 | -1.2 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant | -1.6 | -0.9 | compare |
| nitrogen source | nitrate (N); low aeration | -1.6 | -1.3 | compare |
| carbon source | L-Lactate (C) | -1.6 | -1.2 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant | -1.5 | -0.9 | compare |
| nitrogen source | nitrate (N); low aeration | -1.5 | -1.3 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | -1.5 | -1.3 | compare |
| carbon source | pyruvate (C) | -1.2 | -1.3 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -1.1 | -0.8 | compare |
| carbon source | D,L-Lactate (C) | -1.1 | -1.2 | compare |
| carbon source | D-Mannose (C) | -1.1 | -0.9 | compare |
| nitrogen source | nitrate (N); high aeration | -1.0 | -1.0 | compare |
| stress | Lomefloxacin 0.012 mM | +1.1 | +1.1 | compare |
| vitamin | With vitamins t2 | +2.0 | +0.9 | compare |
| vitamin | No vitamins t2 | +2.5 | +1.2 | compare |
| vitamin | With vitamins t1 | +2.5 | +1.2 | compare |
| vitamin | No vitamins t1 | +3.2 | +1.5 | compare |