Fitness data for HSERO_RS06465 in Herbaspirillum seropedicae SmR1

cell envelope biogenesis protein OmpA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.6 -1.8 compare
carbon source L-Rhamnose (C) -1.6 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -2.0 compare
carbon source D-Glucose (C) -1.4 -1.4 compare
carbon source a-Ketoglutaric (C) -1.4 -2.3 compare
plant Control soil assay; outgrowth in LB -1.3 -1.5 compare
carbon source L-Lactate (C) -1.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.2 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.1 -1.1 compare
stress Fusidic 0.025 mg/ml -1.1 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -1.5 compare
carbon source L-Arabinose (C) -1.0 -1.3 compare
carbon source L-Lactate (C) -0.9 -1.1 compare
carbon source L-Fucose (C) -0.9 -1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +0.9 compare
stress A22 0.04 mg/ml +0.9 +2.2 compare
stress Sisomicin 0.125 mg/ml +1.0 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +1.4 compare
control NoPredeControl +1.1 +1.9 compare