Fitness data for HSERO_RS06455 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: Cys regulon transcriptional activator CysB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Glucose (C) -0.6 -1.7 compare
stress nitrate 200 mM -0.6 -3.0 compare
stress nitrite 20 mM -0.6 -1.5 compare
stress A22 0.04 mg/ml -0.4 -1.4 compare
stress Cisplatin 0.003 mg/ml -0.4 -1.7 compare
stress Fusidic 0.025 mg/ml -0.4 -1.1 compare
carbon source Carbon source Phenylacetic 5 mM -0.4 -2.1 compare
micoeukaryotes C.elegans, mixed culture-2 -0.4 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +1.9 compare
carbon source D-Lactate (C) +0.5 +1.4 compare
vitamin With vitamins t1 +0.5 +1.3 compare
vitamin No vitamins t1 +0.5 +1.4 compare
vitamin No vitamins t2 +0.5 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.1 compare
carbon source D-Glucose (C) +0.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +2.0 compare