Fitness data for HSERO_RS06400 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: Glycine cleavage system transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -1.3 compare
stress Dimethyl Sulfoxide 5 vol% -0.7 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7 -0.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.0 compare
carbon source D,L-Lactate (C) +0.7 +1.8 compare
carbon source L-Arabinose (C) +0.7 +1.0 compare
stress sodium fluoride 100 mM +0.8 +2.2 compare
carbon source L-Rhamnose (C) +0.8 +2.5 compare
carbon source pyruvate (C) +0.8 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +1.8 compare
carbon source L-Fucose (C) +0.8 +1.1 compare
carbon source m-Inositol (C) +0.8 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.8 compare
carbon source L-Lactate (C) +0.8 +2.0 compare
carbon source succinate (C) +0.8 +2.5 compare
carbon source L-Fucose (C) +1.0 +2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +1.0 compare