Fitness data for HSERO_RS06170 in Herbaspirillum seropedicae SmR1

S-adenosylmethionine tRNA ribosyltransferase
SEED: S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)
KEGG: S-adenosylmethionine:tRNA ribosyltransferase-isomerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -2.9 -1.8 compare
stress Sisomicin 0.125 mg/ml -2.1 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.1 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 -1.7 compare
vitamin With vitamins t1 -1.8 -3.3 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.8 -1.4 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.8 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.8 -1.7 compare
carbon source L-Rhamnose (C) -1.7 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.7 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.6 -1.1 compare
carbon source Xylitol (C) -1.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.6 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.6 -1.9 compare
vitamin With vitamins t2 -1.5 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -2.0 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -1.5 -2.0 compare
vitamin No vitamins t2 -1.5 -2.7 compare
vitamin No vitamins t1 -1.5 -2.8 compare