Fitness data for HSERO_RS06145 in Herbaspirillum seropedicae SmR1

NrdR family transcriptional regulator
SEED: Ribonucleotide reductase transcriptional regulator NrdR
KEGG: transcriptional repressor NrdR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
carbon source D-Mannose (C) -3.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.5 -1.4 compare
supernatant control Vogels_fungal_media; pH 5.5 -3.4 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -3.3 -1.5 compare
carbon source L-Fucose (C) -3.2 -1.3 compare
carbon source D-Ribose (C) -3.1 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.5 -1.5 compare
control NoPredeControl -2.5 -0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.4 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.4 -1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.4 -1.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -2.3 -2.4 compare
carbon source D-Xylose (C) -2.3 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.2 -1.3 compare
carbon source L-Arabinose (C) -2.1 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.1 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.0 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 -1.3 compare