Fitness data for HSERO_RS06090 in Herbaspirillum seropedicae SmR1

restriction endonuclease
SEED: Mrr restriction system protein
KEGG: restriction system protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
stress Lomefloxacin 0.012 mM -0.3 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.5 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.2 -1.6 compare
stress Sisomicin 0.125 mg/ml -0.2 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -1.4 compare
carbon source D-Mannose (C) -0.2 -1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.2 +1.5 compare
carbon source D-Gluconic Acid (C) +0.2 +1.3 compare
stress nitrite 20 mM +0.2 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +1.3 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.2 +1.2 compare
carbon source L-Fucose (C) +0.2 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +1.5 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +2.1 compare
plant Control soil assay; outgrowth in LB +0.4 +2.3 compare