Fitness data for HSERO_RS06055 in Herbaspirillum seropedicae SmR1

nitrate transporter
SEED: Nitrate ABC transporter, nitrate-binding protein
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.4 -2.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.4 compare
nitrogen source Ammonium chloride (N); low aeration +0.3 +1.5 compare
stress Lomefloxacin 0.012 mM +0.3 +1.3 compare
plant Control soil assay; outgrowth in LB +0.3 +1.7 compare
nitrogen source nitrate (N); high aeration +0.3 +1.7 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.3 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.5 compare
carbon source a-Ketoglutaric (C) +0.3 +2.0 compare
carbon source D,L-Lactate (C) +0.3 +1.8 compare
carbon source D-Gluconic Acid (C) +0.3 +1.6 compare
carbon source D-Ribose (C) +0.3 +2.0 compare
carbon source L-Rhamnose (C) +0.4 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.6 compare
carbon source D-Glucose (C) +0.5 +2.3 compare