Fitness data for HSERO_RS05970 in Herbaspirillum seropedicae SmR1
ABC transporter
SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)
Or see all 244 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| agar plate interaction control | Taped volatile agar plate with no fungus | -3.3 | -1.3 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | -2.8 | -1.3 | compare |
| plant | Control soil assay; outgrowth in LB | -2.7 | -1.5 | compare |
| carbon source | Xylitol (C) | -2.5 | -1.5 | compare |
| carbon source | L-Arabinose (C) | -2.1 | -1.6 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -2.0 | -1.5 | compare |
| vitamin | With vitamins t2 | -1.8 | -1.6 | compare |
| supernatant control | Vogels_fungal_media; pH 5.5 | -1.8 | -1.7 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | -1.8 | -1.4 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -1.7 | -1.2 | compare |
| carbon source | D-Glucose (C) | -1.7 | -1.2 | compare |
| carbon source | L-Rhamnose (C) | -1.6 | -1.5 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -1.6 | -1.1 | compare |
| carbon source | Glycerol (C) | -1.6 | -1.6 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | -1.5 | -1.2 | compare |
| carbon source | m-Inositol (C) | -1.5 | -1.6 | compare |
| carbon source | D-Ribose (C) | -1.5 | -1.4 | compare |
| r2a control | R2A control | -1.4 | -2.0 | compare |
| carbon source | m-Inositol (C) | +1.4 | +2.0 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | +2.0 | +3.9 | compare |