Fitness data for HSERO_RS05885 in Herbaspirillum seropedicae SmR1

pyrophosphatase
SEED: Pyrophosphate-energized proton pump (EC 3.6.1.1)
KEGG: inorganic pyrophosphatase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.7 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.4 -2.5 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.4 -2.5 compare
carbon source L-Glutamine (C) -0.3 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.0 compare
plant Control soil assay; outgrowth in LB -0.3 -1.4 compare
stress nitrite 20 mM -0.3 -1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.3 compare
micoeukaryotes C.elegans, mixed culture-1 -0.3 -1.2 compare
control NoPredeControl +0.3 +0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +2.1 compare
carbon source L-Arabinose (C) +0.3 +1.9 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.5 compare
carbon source Xylitol (C) +0.6 +3.3 compare