Fitness data for HSERO_RS05825 in Herbaspirillum seropedicae SmR1

ABC transporter substrate-binding protein
SEED: ABC transporter amino acid-binding protein
KEGG: polar amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -2.1 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.4 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.5 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.4 -1.8 compare
nitrogen source nitrate (N); high aeration +0.4 +2.5 compare
carbon source L-Lactate (C) +0.4 +1.8 compare
carbon source D-Ribose (C) +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.4 compare
nutrient Min media with glucose +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.0 compare