Fitness data for HSERO_RS05820 in Herbaspirillum seropedicae SmR1

IclR family transcriptional regulator
SEED: Transcriptional regulator, IclR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.0 -4.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.9 -4.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.7 -6.9 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.7 -7.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.6 -7.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.6 -6.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.5 -5.3 compare
plant Control soil assay; outgrowth in LB -1.2 -3.8 compare
stress Lomefloxacin 0.012 mM -1.1 -4.0 compare
plant Control soil assay; outgrowth in LB -1.0 -2.7 compare
carbon source D-Mannose (C) -1.0 -4.2 compare
carbon source Xylitol (C) -0.9 -3.0 compare
stress Cisplatin 0.003 mg/ml -0.8 -3.1 compare
carbon source D-Ribose (C) -0.8 -3.5 compare
carbon source D-Mannose (C) -0.8 -4.3 compare
carbon source Xylitol (C) -0.8 -3.2 compare
stress nitrite 20 mM -0.7 -4.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +3.2 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +4.0 compare