Fitness data for HSERO_RS05800 in Herbaspirillum seropedicae SmR1

glucarate dehydratase
SEED: Glucarate dehydratase (EC 4.2.1.40)
KEGG: glucarate dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source L-Arabinose (C) -0.7 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.9 compare
carbon source D-Glucose-6-Phosphate (C) -0.4 -2.2 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.4 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.5 compare
control NoPredeControl -0.4 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.6 compare
plant Control soil assay; outgrowth in LB -0.3 -1.5 compare
nutrient casaminos +0.3 +2.2 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.4 compare
carbon source a-Ketoglutaric (C) +0.4 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.0 compare
nitrogen source L-Proline (N) +0.4 +2.2 compare
carbon source D-Xylose (C) +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.0 compare
stress Thallium(I) acetate 0.001 mg/ml +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.5 compare
stress Cisplatin 0.003 mg/ml +0.4 +1.8 compare
stress sodium fluoride 100 mM +0.5 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.6 compare