Fitness data for HSERO_RS05785 in Herbaspirillum seropedicae SmR1

MFS transporter
SEED: Permeases of the major facilitator superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.9 -3.8 compare
carbon source m-Inositol (C) -0.6 -2.6 compare
stress Fusidic 0.025 mg/ml -0.5 -2.1 compare
carbon source L-Asparagine (C) -0.5 -2.2 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.5 -2.6 compare
plant Control soil assay; outgrowth in LB -0.5 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.4 -2.1 compare
stress Thallium(I) acetate 0.001 mg/ml -0.4 -1.8 compare
stress Lomefloxacin 0.012 mM -0.4 -1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.5 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.7 compare
carbon source L-Arabinose (C) +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.4 compare
micoeukaryotes C.elegans, mixed culture-1 +0.5 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.7 compare