Fitness data for HSERO_RS05740 in Herbaspirillum seropedicae SmR1

transcriptional regulator
SEED: predicted biotin regulatory protein BioR (GntR family)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.7 compare
vitamin With vitamins t2 -0.9 -2.7 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.5 compare
vitamin No vitamins t2 -0.7 -2.3 compare
vitamin With vitamins t1 -0.7 -1.9 compare
vitamin No vitamins t1 -0.7 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.0 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.6 -2.1 compare
carbon source D-Gluconic Acid (C) -0.6 -1.5 compare
carbon source D-Glucose (C) -0.6 -1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.5 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.7 compare