Fitness data for HSERO_RS05730 in Herbaspirillum seropedicae SmR1

glucarate dehydratase
SEED: Glucarate dehydratase (EC 4.2.1.40)
KEGG: glucarate dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.4 -2.8 compare
carbon source L-Arabinose (C) -0.4 -1.9 compare
carbon source L-Rhamnose (C) -0.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.3 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.3 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.3 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.3 -1.8 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.3 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.3 -1.4 compare
carbon source D-Mannitol (C) -0.3 -1.5 compare
nitrogen source L-Glutamic (N); low aeration -0.2 -1.6 compare
stress Cisplatin 0.003 mg/ml +0.3 +1.0 compare
carbon source m-Inositol (C) +0.3 +1.4 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.2 compare
carbon source L-Malic (C) +0.3 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +2.0 compare
stress Sisomicin 0.125 mg/ml +0.3 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.8 compare