Fitness data for HSERO_RS05720 in Herbaspirillum seropedicae SmR1

alanine racemase
SEED: Type III PLP / low-specificity D-threonine aldolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Cisplatin 0.003 mg/ml -0.8 -2.4 compare
plant Control soil assay; outgrowth in LB -0.7 -2.3 compare
carbon source D-Galactose (C) -0.6 -2.6 compare
nitrogen source L-Proline (N) -0.5 -1.5 compare
control NoPredeControl -0.5 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.2 compare
control NoPredeControl -0.4 -1.6 compare
carbon source L-Fucose (C) -0.4 -1.8 compare
carbon source D-Xylose (C) -0.4 -1.2 compare
carbon source D-Ribose (C) -0.4 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.9 compare
plant Control soil assay; outgrowth in LB +0.5 +2.0 compare
carbon source Xylitol (C) +0.5 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +3.5 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.7 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.7 compare