Fitness data for HSERO_RS05685 in Herbaspirillum seropedicae SmR1

ABC transporter
KEGG: peptide/nickel transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.7 compare
carbon source D-Sorbitol (C) -0.5 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.2 compare
stress Lomefloxacin 0.012 mM -0.4 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -1.7 compare
vitamin No vitamins t2 -0.3 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
carbon source succinate (C) -0.3 -1.8 compare
carbon source D-Galactose (C) -0.3 -1.3 compare
vitamin With vitamins t2 -0.3 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.3 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3 +0.8 compare
stress nitrate 200 mM +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.6 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.4 +1.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.8 compare