Fitness data for HSERO_RS05680 in Herbaspirillum seropedicae SmR1

DNA-directed RNA polymerase subunit alpha
SEED: Dipeptide transport system permease protein dppC
KEGG: peptide/nickel transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source D-Mannose (C) -1.2 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.8 compare
carbon source m-Inositol (C) -0.7 -1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.7 -2.2 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.6 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.6 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.8 compare
supernatant control Vogels_fungal_media 0.1X +0.7 +1.2 compare
vitamin No vitamins t2 +0.7 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.8 +1.7 compare
control NoPredeControl +0.8 +1.4 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.3 compare
carbon source L-Rhamnose (C) +0.8 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +1.9 compare
carbon source D-Galactose (C) +0.8 +1.3 compare
carbon source L-Arabinose (C) +0.9 +1.8 compare
vitamin With vitamins t2 +0.9 +2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +1.0 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +2.3 +1.5 compare