Fitness data for HSERO_RS05675 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Peptide ABC transporter, permease protein
KEGG: peptide/nickel transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source L-Rhamnose (C) -0.7 -3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.2 compare
carbon source L-Arabinose (C) -0.5 -1.8 compare
carbon source m-Inositol (C) -0.5 -2.2 compare
carbon source Xylitol (C) -0.5 -1.9 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.4 -1.5 compare
carbon source L-Lactate (C) -0.4 -1.4 compare
carbon source pyruvate (C) -0.4 -1.7 compare
carbon source D-Glucose (C) -0.4 -1.1 compare
carbon source Carbon source Phenylacetic 5 mM +0.3 +2.4 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM +0.4 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +2.3 compare
stress Cobalt chloride 0.2 mM +0.4 +1.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
stress nitrate 200 mM +0.4 +1.7 compare
carbon source D-Mannose (C) +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.5 compare
control NoPredeControl +0.8 +2.4 compare