Fitness data for HSERO_RS05655 in Herbaspirillum seropedicae SmR1

D-2-hydroxyacid dehydrogenase
SEED: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
KEGG: gyoxylate/hydroxypyruvate reductase A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
plant Control soil assay; outgrowth in LB -0.8 -3.1 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.8 -4.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.2 compare
carbon source m-Inositol (C) -0.7 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -3.0 compare
stress Chloride stress -0.6 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.4 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.5 -2.8 compare
plant Control soil assay; outgrowth in LB -0.5 -1.9 compare
nitrogen source L-Glutamic (N); high aeration -0.4 -2.5 compare
carbon source D-Galacturonic Acid (C) -0.4 -1.5 compare
carbon source L-Lactate (C) -0.4 -1.5 compare
carbon source D-Gluconic Acid (C) -0.4 -1.6 compare
nitrogen source nitrate (N); high aeration -0.4 -2.3 compare
carbon source D,L-Lactate (C) -0.4 -1.5 compare
carbon source Xylitol (C) -0.4 -1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.2 compare