Fitness data for HSERO_RS05560 in Herbaspirillum seropedicae SmR1

ABC transporter substrate-binding protein
SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress Lomefloxacin 0.012 mM -0.9 -1.5 compare
stress Sisomicin 0.125 mg/ml -0.8 -1.3 compare
carbon source L-Rhamnose (C) -0.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.6 -2.1 compare
control NoPredeControl -0.5 -1.7 compare
carbon source Xylitol (C) -0.5 -1.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.5 -1.6 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.7 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5 +2.3 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.5 +2.5 compare
r2a control R2A control +0.6 +3.1 compare
stress Cisplatin 0.003 mg/ml +0.6 +1.2 compare
carbon source Carbon source D-Glucose 20 mM +0.6 +3.0 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days +0.6 +2.3 compare
carbon source D-Glucose (C) +0.6 +1.5 compare
carbon source L-Arabinose (C) +0.6 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.4 compare