Fitness data for HSERO_RS05485 in Herbaspirillum seropedicae SmR1

phosphoesterase
SEED: L-idonate 5-dehydrogenase (EC 1.1.1.264)
KEGG: L-idonate 5-dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -2.1 compare
carbon source D-Gluconic Acid (C) -0.5 -2.2 compare
carbon source L-Malic (C) -0.5 -2.6 compare
carbon source D-Glucose (C) -0.5 -2.1 compare
carbon source D-Ribose (C) -0.5 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.6 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.4 -1.6 compare
stress Fusidic 0.025 mg/ml +0.4 +1.5 compare
vitamin With vitamins t1 +0.4 +1.4 compare
vitamin No vitamins t2 +0.4 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.5 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +0.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.2 compare
vitamin No vitamins t1 +0.6 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.6 +1.1 compare