Fitness data for HSERO_RS05420 in Herbaspirillum seropedicae SmR1

4-aminobutyrate aminotransferase
SEED: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
KEGG: 4-aminobutyrate aminotransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -3.4 compare
nitrogen source nitrate (N); low aeration -0.6 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.9 compare
stress Chloride stress -0.6 -3.4 compare
nitrogen source nitrate (N); low aeration -0.5 -2.3 compare
carbon source L-mannose (C) -0.5 -2.4 compare
micoeukaryotes C.elegans, mixed culture-2 -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.1 compare
stress Lomefloxacin 0.012 mM +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.8 compare
carbon source a-Ketoglutaric (C) +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.0 compare
stress Sisomicin 0.125 mg/ml +0.6 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.3 +1.7 compare