Fitness data for HSERO_RS05415 in Herbaspirillum seropedicae SmR1

spermidine/putrescine ABC transporter ATPase
SEED: Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.6 compare
stress Cisplatin 0.003 mg/ml -0.3 -1.3 compare
carbon source D-Glucose (C) -0.3 -1.5 compare
nutrient Min media with glucose +0.3 +1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.3 +2.0 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.4 +1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +1.5 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.5 +2.4 compare
vitamin With vitamins t2 +0.6 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.0 compare
plant Control soil assay; outgrowth in LB +0.7 +2.5 compare