Fitness data for HSERO_RS05310 in Herbaspirillum seropedicae SmR1

AraC family transcriptional regulator
SEED: Transcriptional regulator of various polyols utilization, AraC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Xylitol (C) -1.0 -1.8 compare
carbon source D-Ribose (C) -0.7 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.6 compare
carbon source D-Glucose (C) -0.5 -1.5 compare
carbon source succinate (C) -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.1 compare
stress A22 0.02 mg/ml +0.5 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.1 compare
stress A22 0.04 mg/ml +0.5 +1.4 compare
carbon source L-Asparagine (C) +0.5 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.8 compare
stress nitrate 200 mM +0.5 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.8 compare
stress Sisomicin 0.125 mg/ml +0.6 +2.3 compare
nitrogen source L-Proline (N) +0.7 +2.0 compare
carbon source L-Malic (C) +0.7 +2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.7 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.7 +1.9 compare
stress Lomefloxacin 0.012 mM +1.2 +3.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.4 +1.5 compare