Fitness data for HSERO_RS05255 in Herbaspirillum seropedicae SmR1

ABC transporter for L-fucose, permease component (from data)
Original annotation: ribose ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: ribose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
carbon source L-Fucose (C) -1.8 -5.9 compare
carbon source L-Fucose (C) -1.4 -3.2 compare
carbon source D-Ribose (C) -1.2 -3.1 compare
carbon source D-Lactate (C) -0.7 -1.8 compare
carbon source Xylitol (C) -0.6 -3.0 compare
carbon source D-Ribose (C) -0.6 -2.1 compare
carbon source succinate (C) -0.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.6 compare
carbon source Xylitol (C) -0.6 -1.7 compare
carbon source D-Mannose (C) -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.6 compare
stress Fusidic 0.025 mg/ml -0.5 -1.3 compare
carbon source Carbon source Phenylacetic 5 mM +0.5 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.6 compare
carbon source D-Gluconic Acid (C) +0.5 +2.1 compare
stress Lomefloxacin 0.012 mM +0.5 +1.6 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.6 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.1 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +1.9 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.9 +2.2 compare