Fitness data for HSERO_RS05210 in Herbaspirillum seropedicae SmR1

L-arabinose 1-dehydrogenase (EC 1.1.1.46) (from data)
Original annotation: 3-oxoacyl-ACP reductase
SEED: Putative oxidoreductase in arabinose utilization cluster

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
carbon source L-Arabinose (C) -4.1 -5.3 compare
carbon source L-Arabinose (C) -2.9 -4.4 compare
carbon source D-Mannose (C) -1.2 -3.7 compare
carbon source D-Mannose (C) -0.9 -2.1 compare
stress Fusidic 0.025 mg/ml -0.7 -2.3 compare
carbon source L-Lactate (C) -0.7 -2.1 compare
stress sodium fluoride 100 mM -0.7 -2.0 compare
carbon source Xylitol (C) -0.7 -2.2 compare
carbon source D-Glucose (C) -0.5 -1.4 compare
stress nitrite 20 mM -0.5 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.8 compare
carbon source D-Glucose-6-Phosphate (C) +0.5 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.5 +1.9 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.5 +2.3 compare
carbon source L-Fucose (C) +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +0.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.3 compare