Fitness data for HSERO_RS05205 in Herbaspirillum seropedicae SmR1
L-arabonate dehydratase (EC 4.2.1.25) (from data)
Original annotation: dihydroxy-acid dehydratase
SEED: L-arabonate dehydratase (EC 4.2.1.25)
KEGG: dihydroxy-acid dehydratase
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)
Or see all 244 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | L-Arabinose (C) | -3.1 | -7.2 | compare |
| carbon source | L-Arabinose (C) | -2.6 | -5.6 | compare |
| carbon source | D-Mannose (C) | -1.4 | -4.7 | compare |
| carbon source | D-Mannose (C) | -1.0 | -3.3 | compare |
| carbon source | D-Glucose (C) | -0.7 | -2.5 | compare |
| stress | Cobalt chloride 0.2 mM | -0.6 | -2.0 | compare |
| carbon source | D-Galacturonic Acid (C) | -0.6 | -2.3 | compare |
| carbon source | Xylitol (C) | -0.6 | -1.9 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | -0.5 | -2.7 | compare |
| carbon source | L-Glutamine (C) | -0.5 | -1.8 | compare |
| carbon source | D-Lactate (C) | -0.5 | -1.6 | compare |
| agar plate interaction | Taped volatile agar plate with Trichoderma atroviridae IMI | -0.5 | -2.0 | compare |
| carbon source | L-Proline (C) | -0.5 | -2.7 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | -0.5 | -2.4 | compare |
| carbon source | D-Xylose (C) | -0.5 | -1.7 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | +0.4 | +1.4 | compare |
| stress | Sisomicin 0.125 mg/ml | +0.5 | +1.6 | compare |
| carbon source | L-Fucose (C) | +0.5 | +1.3 | compare |
| plant | Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB | +0.5 | +2.3 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant | +1.1 | +1.5 | compare |