Fitness data for HSERO_RS05185 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Putative sugar ABC transport system, permease protein YjfF
KEGG: simple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Mannose (C) -0.5 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.3 compare
carbon source D-Galactose (C) -0.4 -2.5 compare
carbon source Glycerol (C) -0.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.7 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.3 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.8 compare
carbon source L-Fucose (C) +0.3 +1.6 compare
carbon source L-Arabinose (C) +0.4 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.4 +1.7 compare
carbon source Carbon source D-Glucose 20 mM +0.4 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.2 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.0 compare
stress Fusidic 0.025 mg/ml +0.4 +1.5 compare
nitrogen source L-Proline (N) +0.5 +2.2 compare
stress Thallium(I) acetate 0.001 mg/ml +0.5 +2.7 compare
carbon source L-Fucose (C) +0.6 +3.8 compare
carbon source L-Fucose (C) +0.7 +4.4 compare