Fitness data for HSERO_RS05180 in Herbaspirillum seropedicae SmR1

sugar ABC transporter permease
SEED: Putative sugar ABC transport system, permease protein YtfT
KEGG: simple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -1.7 compare
carbon source L-Rhamnose (C) -0.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.8 compare
carbon source D-Xylose (C) -0.5 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.5 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.4 compare
control NoPredeControl +0.6 +1.3 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.6 +1.6 compare
stress Lomefloxacin 0.012 mM +0.6 +1.6 compare
carbon source L-Fucose (C) +0.7 +3.3 compare
carbon source L-Fucose (C) +0.7 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +0.9 compare
carbon source L-Fucose (C) +0.8 +4.0 compare
carbon source D-Ribose (C) +1.0 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +1.1 compare