Fitness data for HSERO_RS05160 in Herbaspirillum seropedicae SmR1

2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) (from data)
Original annotation: 2-dehydro-3-deoxygalactonokinase
SEED: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)
KEGG: 2-dehydro-3-deoxygalactonokinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source D-Galactose (C) -3.4 -8.3 compare
carbon source D-Galactose (C) -2.9 -12.2 compare
carbon source D-Galactose (C) -2.8 -5.2 compare
carbon source D-Galactose (C) -2.7 -6.8 compare
carbon source D-Mannose (C) -0.9 -2.8 compare
carbon source D-Mannose (C) -0.9 -2.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -2.0 compare
plant Control soil assay; outgrowth in LB -0.7 -2.1 compare
stress Fusidic 0.025 mg/ml -0.7 -2.1 compare
carbon source L-Proline (C) -0.6 -2.1 compare
vitamin No vitamins t1 +0.7 +2.3 compare
carbon source D-Glucose (C) +0.7 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.9 compare
carbon source D-Glucose-6-Phosphate (C) +0.7 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.5 +3.0 compare