Fitness data for HSERO_RS05155 in Herbaspirillum seropedicae SmR1

2-dehydro-3-deoxy-6-phosphogalactonate aldolase
SEED: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
KEGG: 2-dehydro-3-deoxyphosphogalactonate aldolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Galactose (C) -7.2 -6.0 compare
carbon source D-Galactose (C) -6.1 -5.2 compare
carbon source D-Galactose (C) -4.5 -5.3 compare
carbon source D-Galactose (C) -4.4 -7.8 compare
carbon source D-Mannose (C) -1.6 -3.9 compare
carbon source D-Galacturonic Acid (C) -0.9 -2.9 compare
micoeukaryotes C.elegans, mixed culture-2 -0.8 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.1 compare
plant Control soil assay; outgrowth in LB -0.6 -2.6 compare
carbon source succinate (C) -0.6 -2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.5 compare
carbon source D-Ribose (C) -0.6 -1.7 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.6 -3.0 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -1.0 compare
plant Control soil assay; outgrowth in LB -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.2 compare
stress Nickel (II) chloride 0.6 mM +0.6 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.0 compare