Fitness data for HSERO_RS05140 in Herbaspirillum seropedicae SmR1

MarR family transcriptional regulator
SEED: Transcriptional regulator, MarR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source D-Ribose (C) -2.6 -2.7 compare
carbon source Xylitol (C) -1.6 -2.4 compare
control NoPredeControl -1.5 -1.4 compare
carbon source D-Sorbitol (C) -1.5 -3.1 compare
carbon source Xylitol (C) -1.3 -2.0 compare
carbon source D-Lactate (C) -1.3 -1.9 compare
micoeukaryotes C.elegans, mixed culture-2 -1.2 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.2 -2.1 compare
carbon source D,L-Lactate (C) -1.2 -2.7 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -1.2 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -1.2 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.7 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.7 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.3 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.8 +1.5 compare
stress sodium fluoride 100 mM +0.9 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.0 +1.4 compare