Fitness data for HSERO_RS05125 in Herbaspirillum seropedicae SmR1

DeoR family transcripitonal regulator
SEED: Deoxyribose operon repressor, DeoR family
KEGG: DeoR family transcriptional regulator, deoxyribose operon repressor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -3.2 -4.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -3.0 -4.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.4 -5.8 compare
carbon source Glycerol (C) -1.9 -3.5 compare
vitamin No vitamins t2 -1.7 -3.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.6 -3.1 compare
carbon source Glycerol (C) -1.6 -4.9 compare
vitamin With vitamins t1 -1.5 -2.6 compare
nutrient Min media with glucose -1.5 -4.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.5 -2.5 compare
carbon source D-Glucose-6-Phosphate (C) -1.4 -3.7 compare
micoeukaryotes C.elegans, mixed culture-2 -1.4 -2.3 compare
vitamin With vitamins t2 -1.4 -3.3 compare
carbon source Xylitol (C) +1.3 +4.7 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +1.5 +6.9 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +1.6 +6.7 compare
carbon source D-Ribose (C) +8.6 +37.6 compare
carbon source D-Ribose (C) +8.7 +45.6 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +9.7 +40.4 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +9.9 +42.8 compare