Fitness data for HSERO_RS05105 in Herbaspirillum seropedicae SmR1

ribokinase
SEED: Ribokinase (EC 2.7.1.15)
KEGG: ribokinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -3.5 -5.7 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -3.5 -4.5 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -3.3 -8.5 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -3.0 -4.7 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -2.8 -2.6 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -2.3 -2.5 compare
stress Cisplatin 0.003 mg/ml -0.7 -2.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -2.1 compare
stress Nickel (II) chloride 0.6 mM -0.5 -2.0 compare
carbon source D-Xylose (C) -0.5 -0.7 compare
carbon source L-Proline (C) +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.2 compare
carbon source D-Lactate (C) +0.5 +1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +1.6 compare
carbon source m-Inositol (C) +0.5 +1.3 compare
carbon source L-Fucose (C) +0.5 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.2 compare
carbon source D-Lactate (C) +0.6 +2.8 compare
carbon source Xylitol (C) +0.7 +2.0 compare