Fitness data for HSERO_RS05090 in Herbaspirillum seropedicae SmR1

sugar ABC transporter ATP-binding protein
SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
KEGG: simple sugar transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -2.5 -10.2 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -2.0 -9.8 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -1.9 -7.6 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -1.1 -4.7 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.5 compare
carbon source L-Fucose (C) -0.4 -1.3 compare
carbon source L-Rhamnose (C) +0.4 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.5 +2.6 compare
carbon source D-Glucose-6-Phosphate (C) +0.5 +2.1 compare
carbon source Carbon source D-Glucose 20 mM +0.5 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.7 compare
carbon source D-Mannose (C) +0.5 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.6 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +10.4 +42.6 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +10.4 +46.4 compare