Fitness data for HSERO_RS05010 in Herbaspirillum seropedicae SmR1

filamentous hemagglutinin outer membrane protein
SEED: Large exoproteins involved in heme utilization or adhesion

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.4 -3.4 compare
plant Control soil assay; outgrowth in LB -0.4 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.3 compare
stress Lomefloxacin 0.012 mM -0.3 -1.6 compare
carbon source D-Xylose (C) -0.3 -1.6 compare
control NoPredeControl -0.2 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -1.4 compare
carbon source D-Lactate (C) -0.2 -1.5 compare
carbon source D-Gluconic Acid (C) -0.2 -1.4 compare
vitamin No vitamins t2 -0.2 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.2 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.2 +1.3 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.2 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.2 +1.4 compare
carbon source Carbon source Phenylacetic 5 mM +0.2 +1.8 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.3 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.3 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.2 compare