Fitness data for HSERO_RS04970 in Herbaspirillum seropedicae SmR1

dioxygenase
SEED: Methionine ABC transporter substrate-binding protein
KEGG: D-methionine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -1.1 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -1.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.9 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.6 compare
carbon source D-Ribose (C) +0.7 +2.0 compare
stress A22 0.04 mg/ml +0.7 +2.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.2 compare
carbon source D-Glucose (C) +0.8 +2.8 compare
carbon source D,L-Malic Acid (C) +0.8 +1.4 compare
carbon source L-mannose (C) +0.8 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +2.0 compare
carbon source a-Ketoglutaric (C) +0.8 +1.6 compare
stress nitrite 20 mM +0.8 +1.6 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.8 +2.8 compare
carbon source L-Rhamnose (C) +0.8 +1.4 compare
carbon source D-Mannitol (C) +0.9 +2.8 compare
plant Control soil assay; outgrowth in LB +1.1 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.6 +2.8 compare