Fitness data for HSERO_RS04870 in Herbaspirillum seropedicae SmR1

glycerol ABC transporter, substrate-binding component (from data)
Original annotation: ABC transporter substrate-binding protein
SEED: Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3)
KEGG: multiple sugar transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Glycerol (C) -2.3 -6.4 compare
carbon source Glycerol (C) -2.2 -4.6 compare
nutrient Min media with glucose -0.9 -5.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.9 -3.3 compare
vitamin With vitamins t1 -0.8 -4.8 compare
vitamin With vitamins t2 -0.8 -3.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7 -3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.7 -3.9 compare
nutrient L-Histidine -0.7 -4.5 compare
nutrient L-Histidine -0.7 -4.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -2.9 compare
nutrient Min media with glucose -0.7 -4.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.7 -2.2 compare
vitamin No vitamins t1 -0.7 -3.2 compare
vitamin No vitamins t2 -0.7 -3.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -3.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.6 -2.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +2.7 compare
stress Chloride stress +0.7 +5.0 compare