Fitness data for HSERO_RS04855 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3)
KEGG: multiple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Glycerol (C) -3.2 -4.1 compare
carbon source Glycerol (C) -2.6 -4.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -2.6 compare
micoeukaryotes C.elegans, mixed culture-2 -1.1 -2.6 compare
vitamin With vitamins t1 -1.0 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -1.0 -1.7 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.0 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.9 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.9 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.8 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.2 compare
nutrient L-Serine -0.8 -2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.8 -2.3 compare
nutrient Min media with glucose -0.8 -2.5 compare
nitrogen source nitrate (N); low aeration +0.8 +3.4 compare
carbon source L-mannose (C) +0.8 +3.5 compare
carbon source Xylitol (C) +0.9 +2.2 compare
carbon source D,L-Lactate (C) +0.9 +3.7 compare
nitrogen source nitrate (N); high aeration +0.9 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +1.1 compare