Fitness data for HSERO_RS04845 in Herbaspirillum seropedicae SmR1
ABC transporter
SEED: Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3)
KEGG: multiple sugar transport system ATP-binding protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)
Or see all 244 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | Glycerol (C) | -3.0 | -3.2 | compare |
| carbon source | Glycerol (C) | -2.5 | -4.8 | compare |
| micoeukaryotes | Acanthamoeba sp., muxed culture-1 | -1.4 | -3.6 | compare |
| vitamin | With vitamins t2 | -1.2 | -3.1 | compare |
| nutrient | Min media with glucose | -1.1 | -3.7 | compare |
| supernatant | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X | -1.0 | -2.6 | compare |
| nitrogen source | Ammonium chloride (N); low aeration | +0.8 | +3.1 | compare |
| carbon source | D-Mannitol (C) | +0.8 | +2.8 | compare |
| carbon source | L-Rhamnose (C) | +0.9 | +2.4 | compare |
| carbon source | L-mannose (C) | +0.9 | +2.6 | compare |
| carbon source | L-mannose (C) | +0.9 | +2.3 | compare |
| carbon source | L-Rhamnose (C) | +0.9 | +3.5 | compare |
| carbon source | L-Rhamnose (C) | +0.9 | +2.9 | compare |
| carbon source | D-Glucose (C) | +1.0 | +4.3 | compare |
| plant | Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB | +1.0 | +3.0 | compare |
| nitrogen source | nitrate (N); low aeration | +1.1 | +3.2 | compare |
| nitrogen source | nitrate (N); low aeration | +1.1 | +3.0 | compare |
| carbon source | D-Glucose (C) | +1.1 | +2.6 | compare |
| stress | Chloride stress | +1.2 | +4.0 | compare |
| stress | Chloride stress | +1.3 | +4.1 | compare |