Fitness data for HSERO_RS04790 in Herbaspirillum seropedicae SmR1

acyl-CoA dehydrogenase
SEED: Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Arabinose (C) -0.9 -2.7 compare
carbon source succinate (C) -0.9 -2.9 compare
carbon source D-Glucose-6-Phosphate (C) -0.6 -2.6 compare
carbon source Carbon source Phenylacetic 5 mM -0.6 -2.0 compare
carbon source D-Glucose (C) -0.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.9 compare
carbon source D-Galactose (C) -0.5 -2.1 compare
carbon source D-Ribose (C) -0.5 -1.7 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.5 -1.9 compare
stress A22 0.04 mg/ml +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.1 compare
stress nitrite 20 mM +0.5 +2.6 compare
carbon source Glycerol (C) +0.5 +1.5 compare
carbon source D-Mannose (C) +0.6 +2.6 compare
nitrogen source nitrate (N); high aeration +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.7 compare