Fitness data for HSERO_RS04730 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
carbon source D-Gluconic Acid (C) -0.7 -1.6 compare
carbon source D-Glucose-6-Phosphate (C) -0.7 -2.3 compare
carbon source D-Glucose (C) -0.6 -1.4 compare
carbon source Xylitol (C) -0.6 -1.9 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.5 -2.4 compare
carbon source L-Asparagine (C) -0.5 -2.0 compare
vitamin No vitamins t2 -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.5 compare
carbon source L-Arabinose (C) -0.4 -1.3 compare
carbon source D,L-Lactate (C) -0.4 -1.7 compare
carbon source L-Glutamine (C) -0.4 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.2 compare
nitrogen source Ammonium chloride (N); low aeration +0.4 +1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +0.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +2.0 compare