Fitness data for HSERO_RS04705 in Herbaspirillum seropedicae SmR1

AraC family transcriptional regulator
SEED: transcriptional regulator, AraC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Rhamnose (C) -1.0 -3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -3.0 compare
carbon source m-Inositol (C) -0.7 -2.6 compare
carbon source D-Galacturonic Acid (C) -0.6 -2.2 compare
r2a control R2A control -0.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.9 compare
carbon source D-Galactose (C) -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.5 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.4 +1.3 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.4 +1.9 compare
stress nitrate 200 mM +0.5 +1.7 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.2 compare
carbon source D,L-Lactate (C) +0.5 +1.6 compare
carbon source L-Proline (C) +0.6 +2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +2.7 compare