Fitness data for HSERO_RS04385 in Herbaspirillum seropedicae SmR1

replication protein
SEED: Phage replication protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.2 compare
carbon source L-Arabinose (C) -0.6 -2.0 compare
carbon source Glycerol (C) -0.6 -2.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.5 compare
carbon source m-Inositol (C) -0.4 -1.5 compare
carbon source D-Gluconic Acid (C) -0.4 -1.5 compare
carbon source L-Rhamnose (C) -0.4 -1.4 compare
carbon source Xylitol (C) -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.2 compare
carbon source m-Inositol (C) +0.4 +1.7 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +1.4 compare
carbon source D-Mannose (C) +0.4 +1.7 compare
stress nitrate 200 mM +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.9 compare
carbon source D-Galacturonic Acid (C) +0.5 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.1 compare
stress Sisomicin 0.125 mg/ml +0.5 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +1.5 compare
nitrogen source L-Proline (N) +0.5 +2.3 compare